FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1348692
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCAAGTG8550.0086247697.5751622
CTTAAAT10900.0011731037.29895971
CTTCTAT13451.9688816E-46.9906221
CTTTGAT24002.5296686E-86.6298881
CTCCGAA10950.0098697746.60511881
TCAGATC16756.535747E-56.4445412
CCCGAAA12750.00609328556.23989441
CTTCAAT17651.2543637E-46.14669041
GTTCTGT14300.00298175156.0693191
GTTCATT13150.0083930126.0500881
AGGAATA17156.141335E-45.8746154
CAAAGCG16050.00167682855.85818531
CTTCTTT39501.2187229E-105.6762221
GTTCCAT19504.8703045E-45.5635431
ATCAATC19605.5830285E-45.50745152
Produced by FastQC (version 0.11.5)