FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1107004
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACGA6300.0059053129.1950341
CTCTATT8659.7294536E-48.37120151
CTCATAG8050.0047522458.0956281
CCCGAAG12801.0534653E-47.35423141
CTTTAAT13200.0086204366.0342411
CTCTTCC16850.00294881315.5865971
Produced by FastQC (version 0.11.5)