FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011621

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011621
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11550409
Sequences flagged as poor quality0
Sequence length100-151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCCC25350.07.9606159
CCCGTAG29350.07.38465171
CCCCCCT14454.8028704E-46.49968621
CACACGT24501.8230876E-65.8836837
GGGGGGG9650.05.82553925-29
ACACGTC28407.330891E-75.58306658
CCCCTAT30354.3288674E-75.4750241
GTGAGTA36109.273572E-85.19741872
AGTGAGT32051.2796881E-65.18461751
CCCTTCG44452.8867362E-95.0385641
Produced by FastQC (version 0.11.5)