FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1895769
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGAGT7650.0030509868.5037991
CTTGAAT19804.5147317E-97.66630361
CCTCGCT13552.692539E-57.46828171
CTCGGCT11900.00298462326.68155671
CTTTCGT16555.211088E-56.55126521
CCCACAA13700.00185691896.33129551
CTTCGAT20654.1252006E-66.3006361
CTTTGGT18654.038751E-56.2011621
CTTACGG13100.0081235416.06950571
CCCAAAT14350.00312334256.0445121
CCCGAAT15600.00120224576.02352481
CTTCGTA16250.00195944475.78258371
CCTCGTT15500.0073522935.59604841
CTTCGGG23302.8958702E-55.58403971
CCCGCAT17350.00425979035.4159641
CTTTAAA20057.144842E-45.40765241
CAATTCA18750.00192516765.36903524
CTTTCAA35807.3894626E-85.2495521
CTTTAAT19400.00276563045.21624761
GGATTTG29056.7723613E-65.19807624
Produced by FastQC (version 0.11.5)