FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011623

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011623
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences752613
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAG4250.003475215811.8901718
CTCATAT5200.001186371411.1573521
TTGGTGG6600.0088393998.7532493
CCGAAGC13000.0075630936.11044173
AATATAA14850.00463006975.83356145
Produced by FastQC (version 0.11.5)