FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences627166
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTCAGG7151.4896588E-410.0958716
TCAAGGT6759.864878E-49.6247317
CTTTTAC8600.0084687017.5893891
ATTTGAA10750.0080369766.74612331
CCTCTGA3000.00518941745.77539155-59
Produced by FastQC (version 0.11.5)