FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011633

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011633
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences968474
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAT4650.006684226410.8921861
CTCAGGA6100.00455532049.4892111
GGGAGAT8100.0050581468.0394711
CTGCAGA10951.4127544E-47.92934131
CTCGCTG9950.00388415957.27188351
CTTTGAT14456.19705E-57.0101961
CTTAAAA10900.0094019566.63809541
CAACAAC13700.00183330346.3376851
CTTTTAT15057.696115E-46.2499541
CTTCTCC18350.0081080895.12598371
Produced by FastQC (version 0.11.5)