FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011639

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011639
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences466714
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGACC2050.00925198117.638611
ACTCCGC2550.001677764716.9212746
CAAGTGC4554.1396057E-412.64582359
ACCCACT1307.1084383E-49.97718725-29
AAAATCT10500.0069345396.8490873
Produced by FastQC (version 0.11.5)