FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011643

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011643
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences458180
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTAGC100.0076815304141.162384
CTCTCGA1700.003610178820.7591764
CTAACTA350.004275249320.16605690-94
CACGACC3356.852377E-414.7483096
GGTTCAT4001.5704423E-414.1796861
CTGCAAT7750.00407293168.2333661
CCGGCAA8050.00573205677.92653271
Produced by FastQC (version 0.11.5)