FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences706612
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACAGTCC3550.001015538114.0031466
AAACTAC4450.0055356711.1710496
GTTCAAT6800.0011898639.4298651
TTCGCCA6050.0049624989.390549
GGGAAAC6300.00674065679.0473491
GTCAGAT7450.00273064528.6071241
CCCGGAA9503.1580968E-48.2497531
TCCACAT9200.00216382237.71912533
CTTTCAT11600.00264980576.75626331
CAAAAAA20900.00150179915.1134841
Produced by FastQC (version 0.11.5)