Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005011648 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4510845 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTAAAC | 1025 | 6.368896E-4 | 7.730354 | 1 |
GTCTAAA | 1380 | 2.8400694E-4 | 6.785702 | 1 |
CTTAAAT | 4425 | 5.11136E-10 | 5.209154 | 1 |
CCCAAAT | 2835 | 2.3788376E-5 | 5.0816817 | 1 |
CTCAAAC | 3280 | 2.1382093E-6 | 5.0510826 | 1 |
CTAAATT | 2870 | 2.9397936E-5 | 5.0197096 | 1 |