FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9896485
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAACT29153.0810043E-85.9486371
CTCACAT41608.731149E-115.55778071
CCCAAGT28704.995525E-65.28666931
CTTCAAT138400.05.11604931
Produced by FastQC (version 0.11.5)