FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences771807
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTAAG2503.3821922E-421.472649145
CTCCTAT4553.7648872E-412.7907971
GATCTTG6456.640956E-410.0495595
AGAGGTT5800.00310161789.9404862
GTAAAAT12950.00673351066.1793381
Produced by FastQC (version 0.11.5)