FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1239167
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAA9502.51467E-48.426991
CTGGCAT8200.0053615357.98788831
TTCGATT10659.5700147E-47.43993142
CTCAAAT10100.0042475917.20579621
GGTAAAT13150.00108094146.64138751
CTGAAGC12150.00345227876.58900361
GGCTATT12200.00360398796.5621
CCACCAC17308.7376044E-56.31027751
CTGAGAC3150.00141382455.94324890-94
GGCAAAC16600.0023257845.69952441
TTCAGAA18200.0012921225.5409282
CTTCAAG18200.00688641845.19846731
Produced by FastQC (version 0.11.5)