FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1231124
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAAAAC19851.0895747E-97.7538921
CCCATGC13653.5420884E-46.66297671
CAACGAT11650.00336151276.60578351
AACATCT13753.9964484E-46.5973245
CCAATAT13904.4183878E-46.5431391
CCGCACA12800.0091586235.99910262
CCAAAAT16404.9706985E-45.9723021
TATTCAG14200.004112335.8968495
TATCAGG14300.0044462545.85561235
CCACGCC16756.5136363E-45.84750751
AAAGATT22301.5121773E-45.31972074
Produced by FastQC (version 0.11.5)