FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011669

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011669
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences992235
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATAACTC6500.0099867228.62410458
CTTATTC10057.2305505E-58.3988351
GTTATTC8050.0061662457.86412671
GATGGCT8200.00752634837.6910917
CTTTTGT18254.3690714E-56.16681581
GTTTGAA12850.008810966.0213441
Produced by FastQC (version 0.11.5)