FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011672

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011672
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences680447
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAGG3200.007550420713.4990362
CTTGCCT5750.002643639210.1336081
CAACGAC6150.0046108759.4745111
CTAAAAT6600.0082389618.8285211
CTCCGAT6750.0099023258.6323331
TGAATTT12607.50812E-46.85665273
AAAAGAT16654.1680768E-46.0536223
CTTTCAT13350.0091077496.0014111
Produced by FastQC (version 0.11.5)