FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences923708
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCTGG5700.002571568410.16815951
GCTCACG6100.0046441729.4669327
CTACGAT6300.00587882669.1997641
CATCAAT17553.2410753E-87.84338761
GGTAAAG11500.0020303166.9298221
CCATTAT11800.00266283086.753641
CAACAAT10850.00888295756.67724751
CTTTTAT19951.5683803E-56.1735261
CTTTCAA15309.24264E-46.1557241
AATTTAA16453.453455E-46.14343455
CTTCCTT15750.0085382885.51985841
Produced by FastQC (version 0.11.5)