FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011687

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011687
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences983705
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAACA5800.00414460669.598521
CACGAAA7550.00381424888.295411
CAACAAT11754.9919344E-47.10698941
GCCAGAT11600.00339628386.59898231
GTTTGAA12800.0094552295.98032761
GGAAGAT14750.0064576095.66149951
GAATTTC14850.0072171065.60479644
Produced by FastQC (version 0.11.5)