FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences533469
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTGCC3050.00542115814.1906337
AATTTAC4352.7630787E-413.2663395
CCTCAAG5106.964668E-512.8114881
AAATTTC7000.00138233689.2754624
Produced by FastQC (version 0.11.5)