FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1060927
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCAAC5600.00225285710.3317581
GTCAGAT8150.00536860677.9865111
AATCTCC13603.4839122E-67.9406335
GGCTGGT9200.00181053157.86111931
CCCAGAT10200.00496860837.0904211
CTCGAAG10800.00864206356.6965091
GTTTCAT15057.740864E-46.2471091
CTTCAAT15800.0090153945.49283271
CTTCCGC18200.00740866465.16587831
CATAAAA18650.0098479015.0412321
Produced by FastQC (version 0.11.5)