FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1423159
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAAG11452.6924063E-58.2063531
CTAAGAA12050.003403736.5980861
AATCCTG18400.00149538295.47743655
TTGAGCA17300.00438184765.40274867
CTTTAAT25852.644572E-55.3125791
Produced by FastQC (version 0.11.5)