FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences997086
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAAGT4800.00833964410.5724211
CGAACGT6250.0054762069.2795651
GGCTACA7000.00137921399.2793869
CACCAGT9700.00297224037.47387651
CTTCAAT16605.2041847E-56.55089761
TCGATAT13300.0013502916.511853
CTGAAAG19000.0020485415.34185461
Produced by FastQC (version 0.11.5)