FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences645826
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT5400.001731084110.66299251
CCTTCAT8559.1913657E-48.4181531
CTTTGAA9500.00259813927.5763371
CTTTCTG9750.00353823887.34091764
CTTTTAT13301.8160089E-47.035171
CTTCCGC12000.00339859476.59772631
Produced by FastQC (version 0.11.5)