FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences683661
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCG1850.004890507619.7004131
CCCAACT3753.6659712E-617.4939671
CTTACTT4000.002051185112.7560181
CAACGGA5752.0552188E-411.4091091
CTTAAAG5850.00303042039.9680731
CTTCAAT11904.0798113E-89.8005421
CATAAAG9150.00158652247.9662871
Produced by FastQC (version 0.11.5)