FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011707

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011707
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449290
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT3453.661464E-516.8168681
CCAAGGA4600.0065852110.9120127
GTTGATT4850.00896843410.4671991
TTTTTCG7700.00346768048.3813976
TCTCTTA3600.0071549345.1819925-29
Produced by FastQC (version 0.11.5)