FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences543133
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCTA1050.007973351527.426211
GTTGATC4400.00473102911.4081932
ACAGCGT4700.007760296610.6741118
TGAATAA7250.0020104588.9017633
AAGATTT10750.0089551686.6705713
Produced by FastQC (version 0.11.5)