FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011715

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011715
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1149525
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCAT4150.002999118312.127411
TCCACTC6300.00638319049.1084562
GTTTGAA11753.972814E-57.9546971
CTTCTAT11552.8185692E-47.4699451
CCACGCT9950.00413306487.22595171
CCCATAT10300.0057842456.98040961
CCTGGAT12607.637161E-46.84744931
CTCAAAA12750.00647857556.2029841
TATTTTG18000.0072958425.1727735
GATTTTC24103.2650065E-45.05224565
Produced by FastQC (version 0.11.5)