FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences723277
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACGAT6809.7432535E-49.63816451
CTTTAAG6250.0057116169.2316066
ATCAAGT6700.0093337398.6951271
TCATTTA9450.00241594977.6330044
CTTTTAT15953.5761477E-67.30499651
CTAAAAA10300.00510459957.0700671
CTTTTCT16252.6300907E-46.27386861
CTTCATC17300.0037612425.472151
Produced by FastQC (version 0.11.5)