FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2607091
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGAT6606.42402E-510.9724761
CCCCAAC11001.589957E-58.5585321
CCCTATT11050.00133921757.20906641
CCTAAAT10600.0071308326.83191971
CCTTTAG10900.009335776.6438851
CCCCGAA18201.8791962E-45.9685451
CTAAAAA32801.5952537E-95.96126651
CCTCAAC16650.00256037465.6542861
AATTAAG18400.0084380585.1093496
CTCGAAA18550.0091247595.07514051
CACCAAT20050.00407729445.0566431
Produced by FastQC (version 0.11.5)