FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences834350
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGAT4800.00868356710.5146378
GTTCGGA5850.00319050449.9067891
CAACAAG8700.00107617488.2859094
CTTTCCC9050.00151372468.0047941
ATCCACC8600.0089263297.5453878
GTTTGAT9950.00383695567.2807431
AATATTG15451.5596379E-46.53219185
CATCAAT18000.00637931475.23202321
Produced by FastQC (version 0.11.5)