FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450881
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGCCG1050.0083898427.1404829
CAAACAA5250.001450782510.8900081
GTAAATA5550.00234072110.2819152
AAATACC6300.00672372249.0488346
CTGAAAT7400.00249525888.6917721
Produced by FastQC (version 0.11.5)