FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences996856
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTAATC5400.001683590710.6997322
GGGGGGG950.007801195610.66933115-119
CCCGAAC6400.00664742159.0633721
CAACTGG9150.00173904937.8932454
CCCAAAA9650.00282166677.51367661
GGCAAAT14304.0366902E-46.5915431
TATTACA14500.003547325.97529277
CATTCTT20200.0046153775.00556764
Produced by FastQC (version 0.11.5)