FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011753

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011753
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences657526
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAT4250.00511050211.2913111
AAAATGG10351.4806025E-47.89634945
GTCACAC3353.5356023E-47.679437145
AGTCACA3353.5356023E-47.3250394140-144
CATCCAA5609.589492E-56.890923145
CAGTCAC4050.00304158736.058983140-144
CACACCA6052.9044732E-45.408018140-144
Produced by FastQC (version 0.11.5)