FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1293712
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTAAT9604.9592456E-47.9119541
CTTCGAT10450.0098330866.60763451
TAGATTT12350.0071466976.14471443
AAGATTC14650.0065968825.65092563
ATTCAAT17250.00111952595.60403971
TTTTACT18050.0020110155.35007246
GAACAAA18450.00264512215.2344865
TATTTGC18550.00283025885.2062685
Produced by FastQC (version 0.11.5)