FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences712041
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGCAAT7603.7103155E-49.2204911
CTTTTAT13153.163228E-67.99342971
AAGACCG8150.0073795177.70744473
GTTCCTT9250.00260090787.5757551
CTTTTTT25453.2196112E-96.608321
CGCCGGA15450.0099569755.44277571
Produced by FastQC (version 0.11.5)