FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465771
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTCAT2100.00962358317.5183141
TTCCCCC3153.615474E-416.043228
CCCTGAT4150.0025186312.4105651
TTATTCG4100.002651476312.3258894
TATAAGG4958.1470836E-411.6677967
CTTCAAT8053.6552025E-510.0539891
CCCCCCC1450.0013615469.293546140-144
CAAAGAA13502.0118223E-57.63019941
ATAATTT12550.00525028776.3278048
Produced by FastQC (version 0.11.5)