FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011775

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011775
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences756200
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT5850.00377979329.705651
CTAAATT5900.0040551159.6233991
TTGACGA7800.00440132578.1642282
GGTCTTT7850.00453580738.1369831
GTTTGTT8800.00140533538.0650641
CTGCACG8500.0095263377.4903948
CTTTTCT14550.0044585635.85340741
Produced by FastQC (version 0.11.5)