FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences859923
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTTAGC3800.001530965213.2623346
CTCGTAT4150.002878510412.1934571
AACATTA6900.00123588829.3912663
CTTGAAT6350.00638665359.1073731
AATTTGC8400.007328347.7138065
GGAACAT10050.00431850237.1930121
CTCAAAA10700.0079306976.7560541
CGCCGAT12858.9701614E-46.75079631
TCAGTTT10900.0098561956.6054783
TCAAAAT17105.830375E-45.89779952
GAATATC15550.0079406265.55624774
Produced by FastQC (version 0.11.5)