FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences470721
Sequences flagged as poor quality0
Sequence length100-151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGTCA400.005818345654.9116251
CCCACCA2358.6030905E-418.693321
CTTGTTT7050.0012884689.3466611
CTATAAT6350.00574394839.2241
TCATTTT14850.0046542325.82967573
Produced by FastQC (version 0.11.5)