FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011788

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011788
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1173369
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA6507.0724566E-49.9818454
AGCACAC6500.0079267718.8712395
GGCACTT9350.00210002887.74361371
GAATCCT10950.00127445137.2420284
CTTATTT17401.4222969E-56.65772771
CACAAAA16550.00238599025.6872281
Produced by FastQC (version 0.11.5)