FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1203113
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTAAC2550.001920957916.5853276
TACCAAC8308.4437034E-48.491789
GTTCCGT12701.2681355E-47.24477861
CTTCTGT15905.2358027E-67.12210461
AATTCAA14200.00367453955.95670135
GTTGTTT14550.00460447845.8371891
GATAAAT19456.2962476E-45.4582971
GATCTGC17000.0045014065.39023075
Produced by FastQC (version 0.11.5)