FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences856416
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACGTAA4655.0917955E-412.3411675
CTGCTAT6203.5783592E-511.6186911
TATAGAC5200.001301636711.0345637
TGCTATT6507.383211E-49.93458752
CATTGAT12500.00516530646.33915761
CTTTGAA12500.00516530646.33915761
Produced by FastQC (version 0.11.5)