FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences927710
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAATCT7900.00512920658.0269413
CAACTTT10250.00633070066.9153991
CTTTAAA13402.4057449E-46.8766931
AAATTTT24153.2388562E-76.12684444
TTTTGCG14100.00341534925.9955167
GTTTCTT17750.00699077735.19141861
Produced by FastQC (version 0.11.5)