FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences917860
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATTGCG5652.0880312E-411.39057356
CCATACA7904.4165726E-49.0619484
CTTGGAT8700.00103535588.3184911
CTTGAAT10900.0011643587.3034831
CTTTAAT13350.00136547566.50524761
CTTGTTT14605.313987E-46.44398261
ATCAAAT19003.3941073E-45.71349051
GAAAATA25701.5818041E-45.01404244
Produced by FastQC (version 0.11.5)