FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences588148
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCCTAG204.0363974E-4107.5719769
CTCTGAA4250.003580666611.8420311
CTGGCTT5350.001615988210.751111
CTTTAAG4750.00819911310.5955021
CTTCGTA6154.347762E-410.5216661
CAAATAG6400.007252288.9666194
CTTTTGT10559.8460834E-58.1779771
CTTTTTT18500.0095780315.0522951
Produced by FastQC (version 0.11.5)