FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1141771
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCTAG1500.001503093924.1426071
CTCAGAT8450.0073286037.71420571
CTTTAAT11602.722151E-47.49253271
CCACGAT13351.7647978E-47.05289651
CTCAGCA14456.119755E-57.0172281
TTTAATG12400.0045836436.41266352
CTTCATT19554.944038E-45.55712181
CTTCAAA19350.00260791145.2402561
CTTGAAA20800.00113495615.223161
Produced by FastQC (version 0.11.5)