FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1491435
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT5307.001194E-613.6195817
ACACGTC5801.7718277E-512.445488
GCACACG7702.263614E-611.2494216
CACGTCT6657.164101E-510.8547059
GTCCGAG7050.00141101059.2568481
AGCACAC9653.319288E-58.9762225
GAGCACA8850.00125712548.1577284
AGAGCAC9700.00309780177.44287543
CTTAAAA14850.0044148155.85955331
Produced by FastQC (version 0.11.5)