FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1138717
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGTTAG3700.001259464413.6108176
CTTCGAT13052.0040534E-78.8392151
AATGTAC9904.6594727E-58.720355
TCTATCG6600.0091219958.720357
CTCCAAC8700.00107581948.2867651
CCAGCCT9000.00150410048.0105391
GGTCAAT8650.0094118837.5011991
CGATAAT12104.6613134E-47.14990331
CGAAGAA20453.6638266E-66.3457571
ATTTGAT16600.00260135115.64598271
CTTCAAA19756.0334086E-45.47555881
Produced by FastQC (version 0.11.5)