FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005011820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005011820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1111806
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC4001.0092417E-515.7285738
CACACGT4552.005856E-615.3636857
CACGTCT5005.3376025E-613.9809539
AGCACAC7151.3647059E-611.7317425
GCACACG6951.2750199E-511.0635666
AGAGCAC7252.035451E-510.6057633
ATTCGAT9102.298907E-48.4970311
GAGCACA8850.00172809837.89848854
CTTTAAA11600.0030568136.6657741
TCCTGTC10500.0091424696.6575979
ATTACAA11850.00382196136.52514551
GATTGAA11900.0042344066.4614955
CTTTGAA16406.748511E-56.4292941
CTTCAAA18801.0001353E-56.3563381
TTTGGCA16053.8056026E-46.09761247
CAATAAA17309.2536985E-45.6885011
TTCAAAT17450.0066710085.2124942
Produced by FastQC (version 0.11.5)